Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spor domain-containing protein | AX767_RS12270 | Not Available | Positive | 2509163 - 2509885 | 24854.8 |
| thiol:disulfide interchange protein dsba/dsbl | AX767_RS12275 | Not Available | Positive | 2509972 - 2510616 | 23608.3 |
| lipopolysaccharide transport periplasmic protein lpta | AX767_RS12280 | Not Available | Positive | 2510699 - 2511388 | 24062.5 |
| lps export abc transporter atp-binding protein | AX767_RS12285 | Not Available | Positive | 2511385 - 2512176 | 28949.0 |
| rna polymerase factor sigma-54 | AX767_RS12290 | Not Available | Positive | 2512185 - 2513783 | 58689.2 |
| thump domain-containing class i sam-dependent rna methyltransferase | AX767_RS12295 | Not Available | Positive | 2513800 - 2515068 | 46229.1 |
| putative toxin-antitoxin system toxin component, pin family | AX767_RS21685 | Not Available | Positive | 2515065 - 2515484 | 14951.2 |
| hypothetical protein | AX767_RS12305 | Not Available | Negative | 2515486 - 2516379 | 32342.9 |
| fmn-binding glutamate synthase family protein | AX767_RS12310 | Not Available | Negative | 2516376 - 2517986 | 57677.3 |
| yeca family protein | AX767_RS12315 | Not Available | Positive | 2518097 - 2518891 | 29683.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
