Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine hydrolase domain-containing protein | AX767_RS00885 | Not Available | Positive | 160509 - 163048 | 92366.6 |
| response regulator transcription factor | AX767_RS00890 | Not Available | Positive | 163045 - 163674 | 23272.3 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | AX767_RS00895 | Not Available | Positive | 163751 - 164596 | 29403.9 |
| m3 family metallopeptidase | AX767_RS00900 | Not Available | Positive | 164638 - 166686 | 75692.4 |
| duf4124 domain-containing protein | AX767_RS22120 | Not Available | Positive | 166721 - 166960 | 7947.65 |
| glutaredoxin family protein | AX767_RS00905 | Not Available | Positive | 166942 - 167355 | 14357.1 |
| ribose-5-phosphate isomerase rpia | AX767_RS00910 | Not Available | Negative | 167363 - 168058 | 24256.1 |
| quinone-dependent dihydroorotate dehydrogenase | AX767_RS00915 | Not Available | Positive | 168100 - 169158 | 37121.7 |
| phage holin family protein | AX767_RS00920 | Not Available | Negative | 169169 - 169873 | 26445.2 |
| glycine zipper domain-containing protein | AX767_RS00925 | Not Available | Negative | 169877 - 170173 | 10314.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
