Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycogen synthase glga | AX767_RS11820 | Not Available | Negative | 2409053 - 2410534 | 53091.6 |
| glucose-1-phosphate adenylyltransferase | AX767_RS11825 | Not Available | Negative | 2410534 - 2411862 | 48649.2 |
| glycogen debranching protein glgx | AX767_RS11830 | Not Available | Negative | 2411919 - 2413979 | 74570.9 |
| txe/yoeb family addiction module toxin | AX767_RS11835 | Not Available | Negative | 2413993 - 2414247 | 9978.05 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | AX767_RS11840 | Not Available | Negative | 2414244 - 2414495 | 9241.0 |
| 1,4-alpha-glucan branching protein glgb | AX767_RS11845 | Not Available | Negative | 2414573 - 2416744 | 80445.9 |
| efflux rnd transporter periplasmic adaptor subunit | AX767_RS11850 | Not Available | Positive | 2416956 - 2418209 | 43420.2 |
| efflux rnd transporter permease subunit | AX767_RS11855 | Not Available | Positive | 2418219 - 2421386 | 112972.0 |
| efflux transporter outer membrane subunit | AX767_RS11860 | Not Available | Positive | 2421388 - 2422875 | 52264.6 |
| leucine--trna ligase | AX767_RS11865 | Not Available | Positive | 2422935 - 2425574 | 97253.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
