Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isochorismatase family protein | AX767_RS00835 | Not Available | Negative | 147334 - 147942 | 22423.0 |
| 4-hydroxyphenylacetate 3-hydroxylase family protein | AX767_RS00840 | Not Available | Positive | 148074 - 149690 | 58881.1 |
| alpha/beta fold hydrolase | AX767_RS00845 | Not Available | Positive | 149701 - 150498 | 28861.0 |
| pqq-dependent sugar dehydrogenase | AX767_RS00850 | Not Available | Negative | 150502 - 151575 | 38434.8 |
| c40 family peptidase | AX767_RS00855 | Not Available | Positive | 151864 - 152421 | 20420.4 |
| class i sam-dependent methyltransferase | AX767_RS00860 | Not Available | Negative | 152486 - 153442 | 34630.8 |
| dihydrolipoyl dehydrogenase | AX767_RS00865 | Not Available | Negative | 153452 - 155287 | 63505.0 |
| mfs transporter | AX767_RS00870 | Not Available | Negative | 155284 - 155874 | 21529.6 |
| dihydrolipoyllysine-residue acetyltransferase | AX767_RS00875 | Not Available | Negative | 155871 - 157538 | 57073.5 |
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | AX767_RS00880 | Not Available | Negative | 157579 - 160290 | 100548.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
