Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | AX767_RS11620 | Not Available | Negative | 2363445 - 2364419 | 34967.7 |
| abc transporter substrate-binding protein | AX767_RS11625 | Not Available | Negative | 2364429 - 2366024 | 58268.5 |
| nad(p)/fad-dependent oxidoreductase | AX767_RS11630 | Not Available | Negative | 2366123 - 2367523 | 51520.9 |
| nuclear transport factor 2 family protein | AX767_RS11635 | Not Available | Negative | 2367545 - 2367943 | 14429.0 |
| plp-dependent aminotransferase family protein | AX767_RS11640 | Not Available | Positive | 2368114 - 2369646 | 56918.1 |
| sensor histidine kinase | AX767_RS11645 | Not Available | Negative | 2369678 - 2370757 | 38197.4 |
| abc transporter permease subunit | AX767_RS11650 | Not Available | Negative | 2370856 - 2371710 | 30956.9 |
| taurine abc transporter atp-binding protein | AX767_RS11655 | Not Available | Negative | 2371703 - 2372491 | 28471.7 |
| taurine abc transporter substrate-binding protein | AX767_RS11660 | Not Available | Negative | 2372526 - 2373521 | 35069.3 |
| excinuclease abc subunit uvra | AX767_RS11665 | Not Available | Negative | 2373701 - 2376742 | 111442.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
