Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crp/fnr family transcriptional regulator | AX767_RS11420 | Not Available | Positive | 2319896 - 2320546 | 23528.7 |
| atp-binding protein | AX767_RS11425 | Not Available | Positive | 2320628 - 2323627 | 106141.0 |
| cytochrome p450 | AX767_RS11430 | Not Available | Positive | 2323635 - 2324849 | 43928.3 |
| hypothetical protein | AX767_RS11435 | Not Available | Positive | 2324859 - 2326601 | 62167.9 |
| dyp-type peroxidase | AX767_RS11440 | Not Available | Positive | 2326598 - 2328052 | 51877.5 |
| meta domain-containing protein | AX767_RS11445 | Not Available | Negative | 2328044 - 2328499 | 15955.1 |
| tetratricopeptide repeat protein | AX767_RS11450 | Not Available | Negative | 2328508 - 2329428 | 33898.4 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | AX767_RS11455 | Not Available | Positive | 2329477 - 2330022 | 18475.3 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | AX767_RS11460 | Not Available | Positive | 2330088 - 2331197 | 39396.2 |
| l-threonylcarbamoyladenylate synthase | AX767_RS11465 | Not Available | Positive | 2331309 - 2332307 | 34545.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
