Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| indolepyruvate ferredoxin oxidoreductase family protein | AX767_RS11320 | Not Available | Positive | 2296492 - 2300100 | 131433.0 |
| preprotein translocase subunit yajc | AX767_RS11325 | Not Available | Positive | 2300287 - 2300616 | 11458.4 |
| protein translocase subunit secd | AX767_RS11330 | Not Available | Positive | 2300684 - 2302573 | 67628.3 |
| protein translocase subunit secf | AX767_RS11335 | Not Available | Positive | 2302585 - 2303538 | 35009.0 |
| duf1631 family protein | AX767_RS11340 | Not Available | Positive | 2303612 - 2306047 | 86937.2 |
| duf494 family protein | AX767_RS11345 | Not Available | Negative | 2306057 - 2306575 | 18914.3 |
| dna-processing protein dpra | AX767_RS11350 | Not Available | Negative | 2306636 - 2307772 | 39347.3 |
| lysm peptidoglycan-binding domain-containing protein | AX767_RS11355 | Not Available | Negative | 2307792 - 2309003 | 43903.1 |
| peptide deformylase | AX767_RS11360 | Not Available | Positive | 2309166 - 2309687 | 19218.4 |
| hypothetical protein | AX767_RS11365 | Not Available | Positive | 2309684 - 2310175 | 18145.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
