Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | AX767_RS11275 | Not Available | Positive | 2285019 - 2285642 | 23275.3 |
| ompa family protein | AX767_RS11280 | Not Available | Negative | 2285664 - 2286203 | 18887.5 |
| ompa family protein | AX767_RS11285 | Not Available | Negative | 2286275 - 2286928 | 22079.1 |
| hypothetical protein | AX767_RS21595 | Not Available | Negative | 2287127 - 2287282 | 5661.95 |
| murein transglycosylase a | AX767_RS11290 | Not Available | Positive | 2287281 - 2288423 | 41405.5 |
| phox family protein | AX767_RS11295 | Not Available | Positive | 2288520 - 2290595 | 72460.6 |
| alpha-ketoglutarate dehydrogenase | AX767_RS11300 | Not Available | Positive | 2290613 - 2293240 | 95038.6 |
| l-threonate dehydrogenase | AX767_RS11305 | Not Available | Positive | 2293302 - 2294186 | 30308.8 |
| mfs transporter | AX767_RS11310 | Not Available | Negative | 2294193 - 2295815 | 58196.3 |
| lrp/asnc family transcriptional regulator | AX767_RS11315 | Not Available | Negative | 2295828 - 2296310 | 17853.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
