Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| chalcone isomerase family protein | AX767_RS11225 | Not Available | Negative | 2269246 - 2269737 | 18429.9 |
| sam-dependent methyltransferase | AX767_RS11230 | Not Available | Negative | 2269770 - 2270987 | 45214.6 |
| duf1365 domain-containing protein | AX767_RS11235 | Not Available | Negative | 2270984 - 2271790 | 30043.8 |
| nad(p)/fad-dependent oxidoreductase | AX767_RS11240 | Not Available | Negative | 2271853 - 2273175 | 48101.1 |
| glutathione peroxidase | AX767_RS11245 | Not Available | Negative | 2273475 - 2274053 | 20659.9 |
| ferritin | AX767_RS11250 | Not Available | Positive | 2274201 - 2275058 | 33635.1 |
| septal ring lytic transglycosylase rlpa family protein | AX767_RS11255 | Not Available | Negative | 2275087 - 2276112 | 35855.6 |
| bifunctional | AX767_RS11260 | Not Available | Negative | 2276123 - 2278828 | 100917.0 |
| yhdp family protein | AX767_RS11265 | Not Available | Positive | 2278917 - 2282966 | 145146.0 |
| two-component system sensor histidine kinase ntrb | AX767_RS11270 | Not Available | Positive | 2283040 - 2284995 | 71222.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
