Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv pilus modification protein pilv | AX767_RS11125 | Not Available | Positive | 2248902 - 2249315 | 14136.0 |
| pilw family protein | AX767_RS11130 | Not Available | Positive | 2249312 - 2250547 | 42717.8 |
| hypothetical protein | AX767_RS11135 | Not Available | Positive | 2250607 - 2251197 | 19585.5 |
| pilus assembly protein | AX767_RS11140 | Not Available | Positive | 2251201 - 2254935 | 131605.0 |
| pgll family o-oligosaccharyltransferase | AX767_RS11145 | Not Available | Positive | 2255034 - 2256671 | 58878.3 |
| cyclic pyranopterin monophosphate synthase moac | AX767_RS11150 | Not Available | Negative | 2256641 - 2257144 | 17022.8 |
| m48 family metalloprotease | AX767_RS11155 | Not Available | Positive | 2257208 - 2258824 | 57655.1 |
| phage holin family protein | AX767_RS11160 | Not Available | Negative | 2258852 - 2259205 | 12345.9 |
| hypothetical protein | AX767_RS11165 | Not Available | Negative | 2259242 - 2259706 | 16596.1 |
| terc family protein | AX767_RS11170 | Not Available | Negative | 2259741 - 2260478 | 25978.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
