Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AX767_RS10970 | Not Available | Negative | 2218755 - 2218937 | 5891.9 |
| dna topoisomerase iii | AX767_RS10975 | Not Available | Negative | 2218956 - 2221904 | 107773.0 |
| set domain-containing protein | AX767_RS10980 | Not Available | Positive | 2221988 - 2222605 | 23210.3 |
| biotin--[acetyl-coa-carboxylase] ligase | AX767_RS10985 | Not Available | Positive | 2222608 - 2223414 | 28484.9 |
| hypothetical protein | AX767_RS10990 | Not Available | Positive | 2223422 - 2223646 | 8084.69 |
| sensor histidine kinase | AX767_RS10995 | Not Available | Negative | 2223669 - 2225108 | 52235.3 |
| response regulator transcription factor | AX767_RS11000 | Not Available | Negative | 2225105 - 2225779 | 24564.0 |
| marr family winged helix-turn-helix transcriptional regulator | AX767_RS11005 | Not Available | Negative | 2225808 - 2226281 | 17189.5 |
| recombinase reca | AX767_RS11010 | Not Available | Positive | 2226428 - 2227543 | 39562.9 |
| recombination regulator recx | AX767_RS11015 | Not Available | Positive | 2227574 - 2228026 | 16603.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
