Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aminoglycoside phosphotransferase family protein | AX767_RS10680 | Not Available | Negative | 2160857 - 2161936 | 40110.2 |
| lps-assembly protein lptd | AX767_RS10685 | Not Available | Positive | 2162031 - 2164442 | 89914.8 |
| peptidylprolyl isomerase | AX767_RS10690 | Not Available | Positive | 2164459 - 2165565 | 40719.1 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | AX767_RS10695 | Not Available | Positive | 2165570 - 2166343 | 28521.0 |
| barstar family protein | AX767_RS10700 | Not Available | Negative | 2166586 - 2167020 | 16554.8 |
| ribonuclease domain-containing protein | AX767_RS10705 | Not Available | Negative | 2167074 - 2167487 | 15356.0 |
| nadp-dependent malic enzyme | AX767_RS10710 | Not Available | Negative | 2167693 - 2170041 | 85041.9 |
| spfh domain-containing protein | AX767_RS10715 | Not Available | Positive | 2170217 - 2171275 | 38006.8 |
| duf4178 domain-containing protein | AX767_RS10720 | Not Available | Positive | 2171297 - 2172775 | 52611.9 |
| duf350 domain-containing protein | AX767_RS10725 | Not Available | Positive | 2172803 - 2173021 | 7879.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
