Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine--trna ligase | AX767_RS00735 | Not Available | Negative | 123276 - 124586 | 47623.2 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | AX767_RS00740 | Not Available | Negative | 124601 - 125875 | 45868.3 |
| helix-turn-helix domain-containing protein | AX767_RS00745 | Not Available | Negative | 125872 - 126810 | 31708.9 |
| type iv pilus biogenesis/stability protein pilw | AX767_RS00750 | Not Available | Negative | 126803 - 127627 | 30016.8 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | AX767_RS00755 | Not Available | Negative | 127638 - 128813 | 43331.0 |
| nucleoside-diphosphate kinase | AX767_RS00760 | Not Available | Negative | 128836 - 129261 | 15186.2 |
| serine hydrolase domain-containing protein | AX767_RS22050 | Not Available | Negative | 129434 - 131118 | 60381.9 |
| smc-scp complex subunit scpb | AX767_RS00770 | Not Available | Negative | 131115 - 131843 | 26730.6 |
| rlua family pseudouridine synthase | AX767_RS00775 | Not Available | Negative | 131971 - 132987 | 36429.1 |
| outer membrane protein assembly factor bamd | AX767_RS00780 | Not Available | Positive | 133011 - 133817 | 30227.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
