Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-oxo-tetronate isomerase | AX767_RS10630 | Not Available | Positive | 2151623 - 2152429 | 29979.5 |
| impact family protein | AX767_RS10635 | Not Available | Positive | 2152446 - 2153033 | 20158.3 |
| ion transporter | AX767_RS10640 | Not Available | Negative | 2152978 - 2153892 | 33492.8 |
| bactofilin family protein | AX767_RS10645 | Not Available | Positive | 2154027 - 2154554 | 18046.5 |
| duf72 domain-containing protein | AX767_RS10650 | Not Available | Negative | 2154551 - 2155330 | 28795.2 |
| m20 family metallopeptidase | AX767_RS10655 | Not Available | Positive | 2155422 - 2156924 | 53668.1 |
| mfs transporter | AX767_RS10660 | Not Available | Negative | 2156946 - 2158115 | 41106.3 |
| yidb family protein | AX767_RS10665 | Not Available | Negative | 2158181 - 2158645 | 14694.8 |
| m20/m25/m40 family metallo-hydrolase | AX767_RS10670 | Not Available | Negative | 2158742 - 2160100 | 47404.3 |
| 16s rrna (uracil(1498)-n(3))-methyltransferase | AX767_RS10675 | Not Available | Negative | 2160141 - 2160857 | 24997.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
