Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase (atp-hydrolyzing) subunit b | AX767_RS10530 | Not Available | Negative | 2131296 - 2133917 | 95991.8 |
| dna polymerase iii subunit beta | AX767_RS10535 | Not Available | Negative | 2133930 - 2135036 | 40234.8 |
| chromosomal replication initiator protein dnaa | AX767_RS10540 | Not Available | Negative | 2135087 - 2136466 | 51530.1 |
| 50s ribosomal protein l34 | AX767_RS10545 | Not Available | Positive | 2136763 - 2136897 | 5110.49 |
| ribonuclease p protein component | AX767_RS10550 | Not Available | Positive | 2136924 - 2137316 | 14084.3 |
| membrane protein insertion efficiency factor yidd | AX767_RS10555 | Not Available | Positive | 2137313 - 2137573 | 9368.65 |
| membrane protein insertase yidc | AX767_RS10560 | Not Available | Positive | 2137576 - 2139312 | 64151.8 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | AX767_RS10565 | Not Available | Positive | 2139389 - 2140795 | 49238.0 |
| crp/fnr family transcriptional regulator | AX767_RS10570 | Not Available | Positive | 2140882 - 2141349 | 16779.5 |
| hypothetical protein | AX767_RS10575 | Not Available | Positive | 2141722 - 2142237 | 17217.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
