Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-ketoacyl-[acyl-carrier-protein] synthase family protein | AX767_RS10330 | Not Available | Positive | 2087219 - 2088451 | 41857.8 |
| sterol desaturase family protein | AX767_RS10335 | Not Available | Positive | 2088459 - 2089589 | 42350.0 |
| aldo/keto reductase | AX767_RS10340 | Not Available | Negative | 2089600 - 2090640 | 37457.7 |
| hipa domain-containing protein | AX767_RS10345 | Not Available | Negative | 2090714 - 2092048 | 48132.8 |
| heavy metal translocating p-type atpase | AX767_RS10350 | Not Available | Negative | 2092116 - 2094323 | 75821.5 |
| heavy-metal-associated domain-containing protein | AX767_RS10355 | Not Available | Positive | 2094448 - 2094648 | 6823.01 |
| merr family dna-binding protein | AX767_RS10360 | Not Available | Positive | 2094717 - 2095073 | 13391.2 |
| two-component system response regulator creb | AX767_RS10365 | Not Available | Positive | 2095547 - 2096311 | 27877.3 |
| two-component system sensor histidine kinase crec | AX767_RS10370 | Not Available | Positive | 2096308 - 2097771 | 53931.0 |
| penicillin-binding protein 1a | AX767_RS10375 | Not Available | Negative | 2097768 - 2100110 | 84671.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
