Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1328 family protein | AX767_RS10280 | Not Available | Negative | 2078268 - 2078453 | 5988.82 |
| glutathione transferase gsta | AX767_RS10285 | Not Available | Positive | 2078622 - 2079230 | 22471.8 |
| cryptochrome/photolyase family protein | AX767_RS10290 | Not Available | Negative | 2079231 - 2080766 | 57772.3 |
| lysr family transcriptional regulator | AX767_RS10295 | Not Available | Negative | 2080775 - 2081656 | 31783.5 |
| sdr family nad(p)-dependent oxidoreductase | AX767_RS10300 | Not Available | Positive | 2081769 - 2082509 | 25101.2 |
| alkene reductase | AX767_RS10305 | Not Available | Positive | 2082769 - 2083872 | 39054.2 |
| sensor histidine kinase | AX767_RS10310 | Not Available | Negative | 2083890 - 2085248 | 48484.3 |
| response regulator transcription factor | AX767_RS10315 | Not Available | Negative | 2085245 - 2085934 | 25198.3 |
| alpha/beta hydrolase | AX767_RS10320 | Not Available | Positive | 2086067 - 2086906 | 31078.3 |
| phosphopantetheine-binding protein | AX767_RS10325 | Not Available | Positive | 2086932 - 2087222 | 10407.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
