Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ugsc family (seleno)protein | AX767_RS22165 | Not Available | Negative | 2028047 - 2028571 | 18485.3 |
| thioredoxin family protein | AX767_RS10040 | Not Available | Negative | 2028568 - 2030004 | 50061.5 |
| phospholipase d family protein | AX767_RS10045 | Not Available | Negative | 2030101 - 2031666 | 56166.2 |
| phospholipase d-like domain-containing protein | AX767_RS10050 | Not Available | Negative | 2031663 - 2033252 | 57924.6 |
| nucleoside recognition domain-containing protein | AX767_RS10055 | Not Available | Positive | 2033303 - 2034532 | 43191.2 |
| flavin reductase family protein | AX767_RS10060 | Not Available | Positive | 2034615 - 2035124 | 17841.0 |
| dmt family transporter | AX767_RS10065 | Not Available | Positive | 2035196 - 2036089 | 32457.3 |
| glutaminase | AX767_RS10070 | Not Available | Positive | 2036100 - 2037026 | 32393.8 |
| duf427 domain-containing protein | AX767_RS10075 | Not Available | Negative | 2037045 - 2037599 | 20802.6 |
| hypothetical protein | AX767_RS10080 | Not Available | Positive | 2037641 - 2038150 | 18753.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
