Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hutd family protein | AX767_RS09940 | Not Available | Negative | 2004827 - 2005414 | 21341.0 |
| urocanate hydratase | AX767_RS09945 | Not Available | Negative | 2005466 - 2007190 | 62295.4 |
| histidine ammonia-lyase | AX767_RS09950 | Not Available | Negative | 2007187 - 2008731 | 52769.8 |
| histidine utilization repressor | AX767_RS09955 | Not Available | Negative | 2008744 - 2009478 | 27527.0 |
| abc transporter atp-binding protein | AX767_RS09960 | Not Available | Negative | 2009486 - 2010265 | 28875.8 |
| abc transporter permease | AX767_RS09965 | Not Available | Negative | 2010268 - 2011059 | 28499.8 |
| abc transporter substrate-binding protein | AX767_RS09970 | Not Available | Negative | 2011056 - 2012015 | 33998.1 |
| dna helicase recq | AX767_RS09975 | Not Available | Positive | 2012249 - 2014156 | 69200.5 |
| atp-binding protein | AX767_RS09980 | Not Available | Negative | 2014165 - 2016489 | 85638.3 |
| threonine ammonia-lyase | AX767_RS09985 | Not Available | Positive | 2016638 - 2017837 | 42177.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
