Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine synthase | AX767_RS09895 | Not Available | Negative | 1989803 - 1992517 | 100171.0 |
| atp-dependent dna helicase ding | AX767_RS09900 | Not Available | Negative | 1993017 - 1995254 | 80481.4 |
| pace efflux transporter | AX767_RS09905 | Not Available | Negative | 1995302 - 1995748 | 16104.9 |
| lysr family transcriptional regulator | AX767_RS09910 | Not Available | Positive | 1995849 - 1996778 | 33056.7 |
| homocysteine s-methyltransferase family protein | AX767_RS09915 | Not Available | Negative | 1996754 - 1997803 | 37714.8 |
| m23 family metallopeptidase | AX767_RS09920 | Not Available | Positive | 1997989 - 2000346 | 86424.8 |
| hypothetical protein | AX767_RS21370 | Not Available | Positive | 2000343 - 2001095 | 27729.1 |
| n-formylglutamate deformylase | AX767_RS09925 | Not Available | Negative | 2001350 - 2002228 | 32030.7 |
| formimidoylglutamate deiminase | AX767_RS09930 | Not Available | Negative | 2002225 - 2003613 | 48966.3 |
| imidazolonepropionase | AX767_RS09935 | Not Available | Negative | 2003610 - 2004830 | 42967.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
