Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AX767_RS09850 | Not Available | Negative | 1981673 - 1982497 | 29853.7 |
| pilus assembly protein tadg-related protein | AX767_RS09855 | Not Available | Negative | 1982575 - 1983921 | 48392.7 |
| flp family type ivb pilin | AX767_RS21575 | Not Available | Negative | 1983944 - 1984195 | 8950.8 |
| hypothetical protein | AX767_RS09865 | Not Available | Negative | 1984273 - 1984707 | 15729.9 |
| lytic transglycosylase domain-containing protein | AX767_RS09870 | Not Available | Negative | 1984704 - 1985453 | 25942.8 |
| arsr/smtb family transcription factor | AX767_RS09875 | Not Available | Positive | 1985754 - 1986131 | 13801.8 |
| hypothetical protein | AX767_RS21365 | Not Available | Positive | 1986156 - 1986632 | 16725.6 |
| gtra family protein | AX767_RS09880 | Not Available | Negative | 1986636 - 1987034 | 14383.6 |
| glycosyltransferase family 2 protein | AX767_RS09885 | Not Available | Negative | 1987031 - 1987996 | 35011.7 |
| arnt family glycosyltransferase | AX767_RS09890 | Not Available | Negative | 1987993 - 1989732 | 62554.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
