Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase family protein | AX767_RS09800 | Not Available | Positive | 1972486 - 1973682 | 41545.3 |
| tade/tadg family type iv pilus assembly protein | AX767_RS09805 | Not Available | Negative | 1973727 - 1974389 | 23836.4 |
| duf192 domain-containing protein | AX767_RS09810 | Not Available | Negative | 1974386 - 1974787 | 14310.9 |
| type ii secretion system f family protein | AX767_RS09815 | Not Available | Negative | 1974787 - 1975659 | 32263.5 |
| type ii secretion system f family protein | AX767_RS09820 | Not Available | Negative | 1975656 - 1976489 | 30169.9 |
| atpase, t2ss/t4p/t4ss family | AX767_RS09825 | Not Available | Negative | 1976482 - 1978278 | 64194.2 |
| type ii and iii secretion system protein family protein | AX767_RS09830 | Not Available | Negative | 1978275 - 1979564 | 46184.8 |
| flp pilus assembly protein cpab | AX767_RS09835 | Not Available | Negative | 1979690 - 1980628 | 33096.9 |
| hypothetical protein | AX767_RS09840 | Not Available | Negative | 1980662 - 1980889 | 7901.7 |
| hypothetical protein | AX767_RS09845 | Not Available | Negative | 1980927 - 1981676 | 27252.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
