Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | AX767_RS09750 | Not Available | Negative | 1962292 - 1963026 | 26874.7 |
| abc transporter atp-binding protein | AX767_RS09755 | Not Available | Negative | 1963023 - 1963835 | 29025.4 |
| abc transporter permease | AX767_RS09760 | Not Available | Negative | 1963832 - 1965727 | 67390.4 |
| abc transporter substrate-binding protein | AX767_RS09765 | Not Available | Negative | 1965755 - 1966951 | 43264.8 |
| amino acid synthesis family protein | AX767_RS09770 | Not Available | Negative | 1967008 - 1967592 | 20225.4 |
| amino acid synthesis family protein | AX767_RS09775 | Not Available | Negative | 1967621 - 1968262 | 22803.6 |
| upf0280 family protein | AX767_RS09780 | Not Available | Negative | 1968273 - 1969181 | 31836.9 |
| 6-hydroxynicotinate reductase | AX767_RS09785 | Not Available | Negative | 1969186 - 1970802 | 56951.4 |
| ferredoxin--nadp reductase | AX767_RS09790 | Not Available | Positive | 1970992 - 1971765 | 29132.1 |
| tetr family transcriptional regulator | AX767_RS09795 | Not Available | Positive | 1971769 - 1972452 | 24951.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
