Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crp/fnr family transcriptional regulator | AX767_RS09475 | Not Available | Negative | 1892248 - 1893078 | 30373.8 |
| ompa family protein | AX767_RS09480 | Not Available | Negative | 1893018 - 1893872 | 30463.1 |
| espr-type extended signal peptide-containing protein | AX767_RS09485 | Not Available | Negative | 1893896 - 1897417 | 113241.0 |
| response regulator transcription factor | AX767_RS09490 | Not Available | Positive | 1897707 - 1898474 | 28429.9 |
| chase2 domain-containing protein | AX767_RS09495 | Not Available | Positive | 1898464 - 1900914 | 87747.0 |
| outer membrane protein assembly factor bame | AX767_RS09500 | Not Available | Negative | 1900857 - 1901264 | 14823.0 |
| carboxypeptidase regulatory-like domain-containing protein | AX767_RS09505 | Not Available | Negative | 1901379 - 1901786 | 14096.0 |
| glycolate oxidase subunit glcf | AX767_RS09510 | Not Available | Negative | 1901783 - 1903036 | 45072.5 |
| glycolate oxidase subunit glce | AX767_RS09515 | Not Available | Negative | 1903043 - 1904185 | 40010.6 |
| smp-30/gluconolactonase/lre family protein | AX767_RS09520 | Not Available | Negative | 1904218 - 1905138 | 33497.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
