Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | AX767_RS09375 | Not Available | Positive | 1870095 - 1871288 | 43077.7 |
| o-antigen ligase family protein | AX767_RS09380 | Not Available | Positive | 1871339 - 1872574 | 45276.5 |
| glycosyltransferase family 2 protein | AX767_RS09385 | Not Available | Negative | 1872571 - 1873467 | 34816.9 |
| transferase | AX767_RS09390 | Not Available | Negative | 1873464 - 1874024 | 20581.9 |
| zinc-finger domain-containing protein | AX767_RS09395 | Not Available | Negative | 1874057 - 1874269 | 7632.18 |
| branched-chain amino acid transaminase | AX767_RS09400 | Not Available | Negative | 1874275 - 1875222 | 34906.7 |
| glycosyltransferase family 2 protein | AX767_RS09405 | Not Available | Negative | 1875283 - 1876200 | 35480.1 |
| recombination-associated protein rdgc | AX767_RS09410 | Not Available | Positive | 1876345 - 1877328 | 35763.2 |
| glycerate kinase | AX767_RS09415 | Not Available | Negative | 1877347 - 1877787 | 15880.5 |
| bcct family transporter | AX767_RS09420 | Not Available | Negative | 1877810 - 1879327 | 54332.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
