Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | AX767_RS09225 | Not Available | Negative | 1839320 - 1840198 | 32128.2 |
| ring-opening amidohydrolase | AX767_RS09230 | Not Available | Negative | 1840207 - 1841325 | 38649.8 |
| dihydroorotase | AX767_RS09235 | Not Available | Negative | 1841322 - 1842782 | 52639.3 |
| sdr family nad(p)-dependent oxidoreductase | AX767_RS09240 | Not Available | Negative | 1842802 - 1843593 | 27591.5 |
| abc transporter substrate-binding protein | AX767_RS09245 | Not Available | Negative | 1843622 - 1844641 | 36459.9 |
| cysteine hydrolase family protein | AX767_RS09250 | Not Available | Negative | 1844645 - 1845502 | 30711.8 |
| lysr family transcriptional regulator | AX767_RS09255 | Not Available | Positive | 1845620 - 1846525 | 33675.8 |
| pyridoxamine 5'-phosphate oxidase family protein | AX767_RS09260 | Not Available | Positive | 1846603 - 1847139 | 19704.1 |
| class ii aldolase/adducin family protein | AX767_RS09265 | Not Available | Positive | 1847331 - 1848098 | 28462.2 |
| gntr family transcriptional regulator | AX767_RS09270 | Not Available | Negative | 1848276 - 1848995 | 27310.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
