Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coa-acylating methylmalonate-semialdehyde dehydrogenase | AX767_RS09125 | Not Available | Positive | 1817673 - 1819190 | 54244.4 |
| amidase | AX767_RS09130 | Not Available | Negative | 1819463 - 1820923 | 52123.9 |
| gmc family oxidoreductase | AX767_RS09135 | Not Available | Positive | 1821124 - 1822764 | 60193.3 |
| sulfite exporter taue/safe family protein | AX767_RS09140 | Not Available | Positive | 1823083 - 1823841 | 26506.0 |
| penicillin-binding protein 2 | AX767_RS09145 | Not Available | Negative | 1823854 - 1825824 | 71444.2 |
| rod shape-determining protein mred | AX767_RS09150 | Not Available | Negative | 1825838 - 1826359 | 19100.1 |
| rod shape-determining protein mrec | AX767_RS09155 | Not Available | Negative | 1826356 - 1827312 | 33805.8 |
| rod shape-determining protein | AX767_RS09160 | Not Available | Negative | 1827328 - 1828371 | 36813.0 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatc | AX767_RS09165 | Not Available | Positive | 1828586 - 1828885 | 10884.0 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gata | AX767_RS09170 | Not Available | Positive | 1828882 - 1830372 | 52169.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
