Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin domain-containing protein | AX767_RS09080 | Not Available | Positive | 1809828 - 1810160 | 11800.5 |
| succinate dehydrogenase, cytochrome b556 subunit | AX767_RS09085 | Not Available | Positive | 1810198 - 1810581 | 13788.4 |
| succinate dehydrogenase, hydrophobic membrane anchor protein | AX767_RS09090 | Not Available | Positive | 1810578 - 1810892 | 11459.4 |
| cbb3-type cytochrome c oxidase subunit i | AX767_RS09095 | Not Available | Positive | 1810943 - 1812670 | 64094.7 |
| hypothetical protein | AX767_RS22065 | Not Available | Negative | 1812674 - 1812805 | 4641.6 |
| abc-type transport auxiliary lipoprotein family protein | AX767_RS09100 | Not Available | Negative | 1812850 - 1813539 | 24059.8 |
| mlad family protein | AX767_RS09105 | Not Available | Negative | 1813552 - 1814508 | 33656.0 |
| abc transporter atp-binding protein | AX767_RS09110 | Not Available | Negative | 1814515 - 1815339 | 29625.1 |
| mlae family abc transporter permease | AX767_RS09115 | Not Available | Negative | 1815336 - 1816502 | 41571.2 |
| lysr family transcriptional regulator | AX767_RS09120 | Not Available | Negative | 1816610 - 1817554 | 34436.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
