Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| elongation factor g | AX767_RS08980 | Not Available | Negative | 1789081 - 1791180 | 77256.0 |
| 30s ribosomal protein s7 | AX767_RS08985 | Not Available | Negative | 1791267 - 1791740 | 17948.2 |
| 30s ribosomal protein s12 | AX767_RS08990 | Not Available | Negative | 1791907 - 1792284 | 13934.0 |
| d-alanyl-d-alanine carboxypeptidase family protein | AX767_RS08995 | Not Available | Negative | 1792445 - 1793617 | 42033.1 |
| alpha/beta hydrolase | AX767_RS09000 | Not Available | Negative | 1793651 - 1794283 | 22140.5 |
| (2fe-2s) ferredoxin domain-containing protein | AX767_RS09005 | Not Available | Negative | 1794286 - 1794627 | 12447.8 |
| vanz family protein | AX767_RS09010 | Not Available | Negative | 1794637 - 1795749 | 40172.5 |
| copd family protein | AX767_RS09015 | Not Available | Negative | 1795752 - 1796180 | 16209.6 |
| porphobilinogen synthase | AX767_RS09020 | Not Available | Positive | 1796501 - 1797526 | 37161.9 |
| magnesium transporter cora family protein | AX767_RS09025 | Not Available | Positive | 1797529 - 1798677 | 42823.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
