Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bug family tripartite tricarboxylate transporter substrate binding protein | AX767_RS08785 | Not Available | Negative | 1758178 - 1759146 | 33111.5 |
| iclr family transcriptional regulator | AX767_RS08790 | Not Available | Positive | 1759252 - 1760040 | 27576.4 |
| tonb-dependent receptor | AX767_RS08795 | Not Available | Negative | 1760051 - 1762138 | 75975.8 |
| hypothetical protein | AX767_RS08800 | Not Available | Negative | 1762135 - 1762671 | 19985.8 |
| hypothetical protein | AX767_RS08805 | Not Available | Negative | 1762846 - 1763409 | 19949.8 |
| serine hydrolase domain-containing protein | AX767_RS08810 | Not Available | Positive | 1763903 - 1765231 | 46721.5 |
| tonb-dependent receptor domain-containing protein | AX767_RS22025 | Not Available | Positive | 1765327 - 1765827 | 17998.2 |
| cobalt abc transporter substrate-binding protein | AX767_RS08815 | Not Available | Positive | 1765847 - 1766587 | 26376.3 |
| duf3649 domain-containing protein | AX767_RS08820 | Not Available | Positive | 1766584 - 1766883 | 10175.9 |
| pepsy-associated tm helix domain-containing protein | AX767_RS08825 | Not Available | Positive | 1766880 - 1768529 | 60670.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
