Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ybed family protein | AX767_RS08735 | Not Available | Positive | 1748273 - 1748554 | 10231.3 |
| lipoyl(octanoyl) transferase lipb | AX767_RS08740 | Not Available | Positive | 1748706 - 1749407 | 25168.2 |
| lipoyl synthase | AX767_RS08745 | Not Available | Positive | 1749418 - 1750410 | 36824.4 |
| 7-carboxy-7-deazaguanine synthase | AX767_RS08750 | Not Available | Positive | 1750427 - 1751062 | 22716.1 |
| 6-carboxytetrahydropterin synthase | AX767_RS08755 | Not Available | Positive | 1751059 - 1751430 | 13774.3 |
| class i adenylate-forming enzyme family protein | AX767_RS08760 | Not Available | Positive | 1751706 - 1753232 | 54610.2 |
| slc13 family permease | AX767_RS08765 | Not Available | Positive | 1753219 - 1754340 | 39734.0 |
| dmt family transporter | AX767_RS08770 | Not Available | Positive | 1754375 - 1755220 | 29296.8 |
| hypothetical protein | AX767_RS08775 | Not Available | Negative | 1755222 - 1755743 | 17842.5 |
| cytochrome p450/oxidoreductase | AX767_RS08780 | Not Available | Negative | 1755802 - 1758162 | 87001.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
