Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crotonase/enoyl-coa hydratase family protein | AX767_RS00540 | Not Available | Negative | 85106 - 85936 | 29203.4 |
| phox family protein | AX767_RS00545 | Not Available | Positive | 85951 - 87843 | 67798.9 |
| coa transferase | AX767_RS00550 | Not Available | Positive | 87888 - 88763 | 30282.6 |
| crp/fnr family transcriptional regulator | AX767_RS00555 | Not Available | Negative | 88775 - 89500 | 26217.0 |
| mfs transporter | AX767_RS00560 | Not Available | Positive | 89757 - 90968 | 41687.8 |
| hypothetical protein | AX767_RS00565 | Not Available | Negative | 90973 - 91863 | 32694.9 |
| ygiq family radical sam protein | AX767_RS00570 | Not Available | Negative | 91882 - 94251 | 87525.7 |
| bifunctional helix-turn-helix transcriptional regulator/gnat family n-acetyltransferase | AX767_RS00575 | Not Available | Positive | 94414 - 95364 | 35163.4 |
| tripartite tricarboxylate transporter permease | AX767_RS00580 | Not Available | Negative | 95354 - 96853 | 52524.4 |
| tripartite tricarboxylate transporter tctb family protein | AX767_RS00585 | Not Available | Negative | 96799 - 97329 | 19325.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
