Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna ligase | AX767_RS08635 | Not Available | Negative | 1729522 - 1731192 | 62194.7 |
| ligase-associated dna damage response exonuclease | AX767_RS08640 | Not Available | Negative | 1731189 - 1732268 | 38967.1 |
| duf1090 family protein | AX767_RS21565 | Not Available | Positive | 1732546 - 1732842 | 11049.3 |
| duf3617 domain-containing protein | AX767_RS08650 | Not Available | Negative | 1732870 - 1733382 | 18077.9 |
| phosphatase pap2 family protein | AX767_RS08655 | Not Available | Negative | 1733379 - 1734062 | 24807.9 |
| gfo/idh/moca family protein | AX767_RS08660 | Not Available | Negative | 1734047 - 1735201 | 41391.0 |
| substrate-binding domain-containing protein | AX767_RS08665 | Not Available | Negative | 1735201 - 1736169 | 34640.8 |
| abc transporter permease | AX767_RS08670 | Not Available | Negative | 1736213 - 1737229 | 35090.8 |
| sugar abc transporter atp-binding protein | AX767_RS08675 | Not Available | Negative | 1737198 - 1738712 | 54633.3 |
| rok family protein | AX767_RS08680 | Not Available | Negative | 1738709 - 1739878 | 40514.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
