Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lema family protein | AX767_RS08590 | Not Available | Positive | 1721860 - 1722474 | 22737.0 |
| tpm domain-containing protein | AX767_RS08595 | Not Available | Positive | 1722490 - 1723407 | 30547.1 |
| tpm domain-containing protein | AX767_RS08600 | Not Available | Positive | 1723410 - 1723937 | 19600.6 |
| cyclic nucleotide-binding domain-containing protein | AX767_RS08605 | Not Available | Negative | 1723947 - 1724516 | 20383.7 |
| ligase-associated dna damage response endonuclease pdem | AX767_RS08610 | Not Available | Negative | 1724542 - 1725159 | 22010.6 |
| hypothetical protein | AX767_RS08615 | Not Available | Negative | 1725277 - 1725825 | 19430.0 |
| ligase-associated dna damage response dexh box helicase | AX767_RS08620 | Not Available | Negative | 1725900 - 1728530 | 95626.4 |
| hypothetical protein | AX767_RS21325 | Not Available | Negative | 1728664 - 1728816 | 5912.18 |
| brnt family toxin | AX767_RS08625 | Not Available | Positive | 1728995 - 1729276 | 10579.5 |
| brna antitoxin family protein | AX767_RS08630 | Not Available | Positive | 1729285 - 1729494 | 8140.74 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
