Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione s-transferase | AX767_RS08540 | Not Available | Negative | 1711338 - 1712066 | 26656.6 |
| Trna-arg | Not Available | Not Available | Positive | 1712160 - 1712234 | Not Available |
| tetr family transcriptional regulator | AX767_RS08550 | Not Available | Negative | 1712245 - 1712934 | 25602.2 |
| efflux rnd transporter periplasmic adaptor subunit | AX767_RS08555 | Not Available | Positive | 1713101 - 1714378 | 43269.9 |
| efflux rnd transporter permease subunit | AX767_RS08560 | Not Available | Positive | 1714392 - 1717553 | 112511.0 |
| efflux transporter outer membrane subunit | AX767_RS08565 | Not Available | Positive | 1717546 - 1718961 | 50382.8 |
| c-type cytochrome | AX767_RS08570 | Not Available | Positive | 1719027 - 1719677 | 21996.2 |
| duf2946 family protein | AX767_RS08575 | Not Available | Negative | 1719725 - 1720252 | 19372.8 |
| yhet family hydrolase | AX767_RS08580 | Not Available | Negative | 1720292 - 1721284 | 35448.3 |
| yybh family protein | AX767_RS08585 | Not Available | Negative | 1721293 - 1721739 | 15919.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
