Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | AX767_RS08490 | Not Available | Positive | 1703424 - 1704089 | 23962.6 |
| gnat family n-acetyltransferase | AX767_RS08495 | Not Available | Positive | 1704086 - 1704634 | 19708.8 |
| yggs family pyridoxal phosphate-dependent enzyme | AX767_RS08500 | Not Available | Negative | 1704597 - 1705325 | 25651.0 |
| type iv pilus twitching motility protein pilt | AX767_RS08505 | Not Available | Positive | 1705373 - 1706416 | 38078.1 |
| pilt/pilu family type 4a pilus atpase | AX767_RS08510 | Not Available | Positive | 1706430 - 1707566 | 41854.5 |
| nad(p)-dependent oxidoreductase | AX767_RS08515 | Not Available | Positive | 1707601 - 1708524 | 31676.1 |
| bon domain-containing protein | AX767_RS08520 | Not Available | Negative | 1708538 - 1709305 | 26718.2 |
| sis domain-containing protein | AX767_RS08525 | Not Available | Negative | 1709302 - 1709922 | 21161.2 |
| yran family protein | AX767_RS08530 | Not Available | Negative | 1709977 - 1710384 | 14472.2 |
| 16s rrna (cytidine(1402)-2'-o)-methyltransferase | AX767_RS08535 | Not Available | Positive | 1710384 - 1711328 | 32934.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
