Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-linked oxidase c-terminal domain-containing protein | AX767_RS08340 | Not Available | Positive | 1668380 - 1669885 | 53468.3 |
| cida/lrga family protein | AX767_RS08345 | Not Available | Positive | 1669885 - 1670235 | 12561.1 |
| lrgb family protein | AX767_RS08350 | Not Available | Positive | 1670235 - 1670960 | 24904.1 |
| yxwgxw repeat-containing protein | AX767_RS08355 | Not Available | Negative | 1670965 - 1671372 | 15507.2 |
| gdsl-type esterase/lipase family protein | AX767_RS08360 | Not Available | Negative | 1671489 - 1672721 | 43038.4 |
| carboxyl transferase domain-containing protein | AX767_RS08365 | Not Available | Negative | 1672797 - 1676099 | 115728.0 |
| amp-binding protein | AX767_RS08370 | Not Available | Negative | 1676101 - 1677720 | 58466.4 |
| tetr/acrr family transcriptional regulator | AX767_RS08375 | Not Available | Positive | 1677795 - 1678460 | 25153.0 |
| bifunctional cytochrome p450/nadph--p450 reductase | AX767_RS08380 | Not Available | Positive | 1678557 - 1681784 | 118569.0 |
| manganese efflux pump mntp | AX767_RS08385 | Not Available | Negative | 1681789 - 1682355 | 19537.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
