Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| d-amino acid dehydrogenase | AX767_RS08245 | Not Available | Positive | 1649428 - 1650690 | 46302.3 |
| duf2141 domain-containing protein | AX767_RS08250 | Not Available | Positive | 1650801 - 1651217 | 14272.0 |
| carotenoid oxygenase family protein | AX767_RS08255 | Not Available | Positive | 1651226 - 1652725 | 53901.5 |
| fist signal transduction protein | AX767_RS08260 | Not Available | Negative | 1652749 - 1654029 | 44516.9 |
| pham family polyhydroxyalkanoate granule multifunctional regulatory protein | AX767_RS08265 | Not Available | Negative | 1654034 - 1654669 | 22445.7 |
| copper chaperone pcu(a)c | AX767_RS08270 | Not Available | Negative | 1654732 - 1655217 | 16559.4 |
| copper chaperone pcu(a)c | AX767_RS22155 | Not Available | Negative | 1655289 - 1656182 | 30670.9 |
| tonb-dependent receptor | AX767_RS08280 | Not Available | Negative | 1656203 - 1658515 | 83186.0 |
| duf2946 family protein | AX767_RS08285 | Not Available | Negative | 1658590 - 1658961 | 12530.5 |
| trab/gumn family protein | AX767_RS08290 | Not Available | Negative | 1658987 - 1659967 | 34957.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
