Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AX767_RS00500 | Not Available | Positive | 79204 - 79530 | 11971.8 |
| hypothetical protein | AX767_RS00505 | Not Available | Positive | 79527 - 79751 | 8361.01 |
| tyrosine-type recombinase/integrase | AX767_RS00510 | Not Available | Positive | 79748 - 80764 | 38186.2 |
| hypothetical protein | AX767_RS22045 | Not Available | Positive | 80861 - 80992 | 4915.99 |
| hypothetical protein | AX767_RS00515 | Not Available | Positive | 80989 - 81270 | 10281.3 |
| duf1508 domain-containing protein | AX767_RS21155 | Not Available | Positive | 81679 - 81852 | 6504.58 |
| response regulator | AX767_RS00520 | Not Available | Negative | 82294 - 82659 | 13547.0 |
| class i adenylate-forming enzyme family protein | AX767_RS00525 | Not Available | Negative | 82754 - 83329 | 20720.0 |
| amp-binding protein | AX767_RS00530 | Not Available | Negative | 83287 - 84333 | 37581.3 |
| nitroreductase | AX767_RS00535 | Not Available | Positive | 84437 - 85105 | 24709.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
