Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine pyrophosphate-dependent dehydrogenase e1 component subunit alpha | AX767_RS08005 | Not Available | Positive | 1607101 - 1608120 | 34869.2 |
| alpha-ketoacid dehydrogenase subunit beta | AX767_RS08010 | Not Available | Positive | 1608111 - 1609073 | 33502.5 |
| marr family winged helix-turn-helix transcriptional regulator | AX767_RS08015 | Not Available | Positive | 1609083 - 1609508 | 15540.7 |
| hypothetical protein | AX767_RS08020 | Not Available | Positive | 1609567 - 1609950 | 12780.3 |
| bug family tripartite tricarboxylate transporter substrate binding protein | AX767_RS08025 | Not Available | Positive | 1609947 - 1610963 | 35248.6 |
| duf1840 domain-containing protein | AX767_RS21875 | Not Available | Negative | 1610982 - 1611305 | 11903.1 |
| serine hydrolase domain-containing protein | AX767_RS08030 | Not Available | Negative | 1611324 - 1612583 | 46607.8 |
| bifunctional salicylyl-coa 5-hydroxylase/oxidoreductase | AX767_RS08035 | Not Available | Positive | 1612692 - 1615073 | 86559.7 |
| marr family winged helix-turn-helix transcriptional regulator | AX767_RS08040 | Not Available | Positive | 1615079 - 1615555 | 18172.9 |
| enoyl-coa hydratase family protein | AX767_RS08045 | Not Available | Positive | 1615552 - 1616406 | 30431.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
