Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fadr/gntr family transcriptional regulator | AX767_RS07355 | Not Available | Positive | 1476214 - 1476921 | 26177.3 |
| sialic acid trap transporter substrate-binding protein siap | AX767_RS07360 | Not Available | Positive | 1476965 - 1477963 | 36714.9 |
| trap transporter small permease | AX767_RS07365 | Not Available | Positive | 1477974 - 1478534 | 21226.9 |
| trap transporter large permease | AX767_RS07370 | Not Available | Positive | 1478544 - 1479941 | 49770.6 |
| uxaa family hydrolase | AX767_RS07375 | Not Available | Positive | 1479962 - 1481488 | 53790.9 |
| malate/lactate/ureidoglycolate dehydrogenase | AX767_RS07380 | Not Available | Positive | 1481506 - 1482567 | 36440.5 |
| nucleoid occlusion factor slma | AX767_RS07385 | Not Available | Negative | 1482583 - 1483227 | 23394.1 |
| acetylglutamate kinase | AX767_RS07390 | Not Available | Negative | 1483324 - 1484217 | 31546.4 |
| glycosyltransferase family 4 protein | AX767_RS07395 | Not Available | Negative | 1484270 - 1485367 | 39918.2 |
| glycosyltransferase | AX767_RS07400 | Not Available | Positive | 1485412 - 1486176 | 28923.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
