Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase biotin carboxyl carrier protein subunit | AX767_RS07105 | Not Available | Positive | 1425352 - 1425567 | 7353.01 |
| hypothetical protein | AX767_RS07110 | Not Available | Negative | 1425583 - 1425927 | 12125.6 |
| efflux transporter outer membrane subunit | AX767_RS07115 | Not Available | Negative | 1425924 - 1427411 | 51962.7 |
| efflux rnd transporter permease subunit | AX767_RS07120 | Not Available | Negative | 1427408 - 1430530 | 113056.0 |
| efflux rnd transporter periplasmic adaptor subunit | AX767_RS07125 | Not Available | Negative | 1430523 - 1431671 | 40090.3 |
| response regulator transcription factor | AX767_RS07130 | Not Available | Positive | 1431817 - 1432500 | 25131.7 |
| sensor histidine kinase | AX767_RS07135 | Not Available | Positive | 1432497 - 1433918 | 49867.1 |
| mbl fold metallo-hydrolase | AX767_RS07140 | Not Available | Positive | 1433978 - 1435666 | 61191.8 |
| rna pseudouridine synthase | AX767_RS07145 | Not Available | Positive | 1435663 - 1436370 | 25643.4 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 1436376 - 1436740 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
