Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf484 family protein | AX767_RS07005 | Not Available | Negative | 1404132 - 1404821 | 25464.3 |
| diaminopimelate epimerase | AX767_RS07010 | Not Available | Negative | 1404835 - 1405713 | 31134.1 |
| fmn-binding negative transcriptional regulator | AX767_RS07015 | Not Available | Negative | 1405740 - 1406363 | 22486.9 |
| helix-turn-helix domain-containing protein | AX767_RS07020 | Not Available | Negative | 1406472 - 1407254 | 27537.3 |
| hypothetical protein | AX767_RS21550 | Not Available | Negative | 1407325 - 1407591 | 9322.29 |
| lysr substrate-binding domain-containing protein | AX767_RS07030 | Not Available | Negative | 1407622 - 1408515 | 32500.2 |
| mfs transporter | AX767_RS07035 | Not Available | Positive | 1408614 - 1409816 | 41336.7 |
| 2,5-didehydrogluconate reductase dkgb | AX767_RS07040 | Not Available | Positive | 1409842 - 1410654 | 29085.9 |
| hypothetical protein | AX767_RS07045 | Not Available | Positive | 1410814 - 1411131 | 10692.9 |
| amidohydrolase family protein | AX767_RS07050 | Not Available | Negative | 1411138 - 1412328 | 41701.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
