Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | AX767_RS06955 | Not Available | Negative | 1393954 - 1394877 | 33814.4 |
| division/cell wall cluster transcriptional repressor mraz | AX767_RS06960 | Not Available | Negative | 1394887 - 1395315 | 15865.0 |
| atp-dependent protease atpase subunit hslu | AX767_RS06965 | Not Available | Negative | 1395576 - 1396898 | 48785.6 |
| atp-dependent protease subunit hslv | AX767_RS06970 | Not Available | Negative | 1396910 - 1397455 | 19398.3 |
| stas domain-containing protein | AX767_RS06975 | Not Available | Negative | 1397523 - 1399124 | 57702.3 |
| rna polymerase-binding protein dksa | AX767_RS06980 | Not Available | Negative | 1399173 - 1400003 | 29641.9 |
| cobw family gtp-binding protein | AX767_RS06985 | Not Available | Negative | 1400279 - 1401334 | 39120.6 |
| class i sam-dependent rrna methyltransferase | AX767_RS06990 | Not Available | Negative | 1401403 - 1402605 | 43570.9 |
| tyrosine recombinase xerc | AX767_RS06995 | Not Available | Negative | 1402602 - 1403534 | 33972.9 |
| ydcf family protein | AX767_RS07000 | Not Available | Negative | 1403518 - 1404123 | 21955.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
