Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-7-phosphoheptulonate synthase | AX767_RS06810 | Not Available | Negative | 1359212 - 1360330 | 40291.0 |
| metalloprotease tldd | AX767_RS06815 | Not Available | Negative | 1360531 - 1361991 | 51168.6 |
| rod shape-determining protein roda | AX767_RS06820 | Not Available | Negative | 1362020 - 1363174 | 41635.4 |
| histidine kinase | AX767_RS06825 | Not Available | Negative | 1363204 - 1365057 | 67501.0 |
| response regulator transcription factor | AX767_RS06830 | Not Available | Negative | 1365073 - 1365816 | 26689.0 |
| carboxypeptidase regulatory-like domain-containing protein | AX767_RS06835 | Not Available | Positive | 1366206 - 1368131 | 67296.6 |
| yqia/ycfp family alpha/beta fold hydrolase | AX767_RS06840 | Not Available | Positive | 1368237 - 1368833 | 22268.7 |
| ribonuclease catalytic domain-containing protein | AX767_RS06845 | Not Available | Positive | 1368879 - 1370930 | 74289.3 |
| energy transducer tonb | AX767_RS06850 | Not Available | Positive | 1370927 - 1371775 | 31119.3 |
| shikimate dehydrogenase | AX767_RS06855 | Not Available | Positive | 1371786 - 1372622 | 28644.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
