Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | AX767_RS20965 | Not Available | Positive | 1305853 - 1307163 | 49129.4 |
| hypothetical protein | AX767_RS21295 | Not Available | Positive | 1307138 - 1308724 | 59485.9 |
| hypothetical protein | AX767_RS21300 | Not Available | Positive | 1308705 - 1311068 | 88949.3 |
| hypothetical protein | AX767_RS21305 | Not Available | Positive | 1311082 - 1311531 | 16978.1 |
| trna 2-thiocytidine(32) synthetase ttca | AX767_RS06630 | Not Available | Negative | 1311528 - 1312367 | 31336.1 |
| serine hydrolase domain-containing protein | AX767_RS06635 | Not Available | Positive | 1312660 - 1313409 | 27879.7 |
| duf4136 domain-containing protein | AX767_RS06640 | Not Available | Positive | 1313446 - 1314072 | 22713.8 |
| histidine phosphatase family protein | AX767_RS06645 | Not Available | Positive | 1314077 - 1314715 | 23080.4 |
| type i polyketide synthase | AX767_RS06650 | Not Available | Positive | 1315113 - 1322312 | 256475.0 |
| non-ribosomal peptide synthetase | AX767_RS06655 | Not Available | Positive | 1322309 - 1327327 | 181958.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
