Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| multicopper oxidase family protein | AX767_RS06580 | Not Available | Negative | 1296967 - 1298382 | 51890.4 |
| tolc family protein | AX767_RS06585 | Not Available | Negative | 1298403 - 1299827 | 51511.3 |
| hypothetical protein | AX767_RS06590 | Not Available | Negative | 1299824 - 1300234 | 13969.4 |
| hypothetical protein | AX767_RS20950 | Not Available | Negative | 1300355 - 1300771 | 14148.8 |
| dmt family transporter | AX767_RS06595 | Not Available | Negative | 1300852 - 1301916 | 37513.7 |
| antitoxin vbha family protein | AX767_RS20955 | Not Available | Negative | 1302114 - 1302293 | 6512.67 |
| hypothetical protein | AX767_RS06605 | Not Available | Negative | 1303108 - 1303509 | 15038.9 |
| bpsl0761 family protein | AX767_RS21290 | Not Available | Negative | 1303954 - 1304202 | 9479.29 |
| hypothetical protein | AX767_RS06610 | Not Available | Negative | 1304261 - 1304830 | 20651.7 |
| helix-turn-helix transcriptional regulator | AX767_RS20960 | Not Available | Positive | 1304873 - 1305046 | 6609.98 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
