Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| copper-binding protein | AX767_RS06530 | Not Available | Negative | 1285808 - 1286152 | 12139.9 |
| efflux rnd transporter permease subunit | AX767_RS06535 | Not Available | Negative | 1286195 - 1289359 | 113920.0 |
| efflux rnd transporter periplasmic adaptor subunit | AX767_RS06540 | Not Available | Negative | 1289356 - 1290921 | 54618.6 |
| tolc family protein | AX767_RS06545 | Not Available | Negative | 1290918 - 1292153 | 44201.4 |
| hypothetical protein | AX767_RS06550 | Not Available | Negative | 1292231 - 1292614 | 13806.2 |
| heavy metal translocating p-type atpase | AX767_RS06555 | Not Available | Negative | 1292633 - 1294957 | 80856.7 |
| duf305 domain-containing protein | AX767_RS21870 | Not Available | Negative | 1295164 - 1295604 | 15985.6 |
| four-helix bundle copper-binding protein | AX767_RS20945 | Not Available | Negative | 1295583 - 1295912 | 11240.7 |
| copper-binding protein | AX767_RS06570 | Not Available | Negative | 1295994 - 1296362 | 12949.8 |
| cupredoxin domain-containing protein | AX767_RS06575 | Not Available | Negative | 1296421 - 1296921 | 17533.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
