Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mechanosensitive ion channel domain-containing protein | AX767_RS06240 | Not Available | Positive | 1234388 - 1234909 | 18904.4 |
| mgtc/sapb family protein | AX767_RS06245 | Not Available | Positive | 1234919 - 1235458 | 18752.3 |
| glutathione s-transferase family protein | AX767_RS06250 | Not Available | Positive | 1235557 - 1236240 | 25141.3 |
| phosphatase | AX767_RS06255 | Not Available | Positive | 1236267 - 1237391 | 40321.4 |
| trehalose-phosphatase | AX767_RS06260 | Not Available | Positive | 1237485 - 1238237 | 26955.3 |
| alpha,alpha-trehalose-phosphate synthase (udp-forming) | AX767_RS06265 | Not Available | Positive | 1238237 - 1239625 | 52299.8 |
| lysr family transcriptional regulator | AX767_RS06270 | Not Available | Negative | 1239647 - 1240543 | 32965.3 |
| sdr family nad(p)-dependent oxidoreductase | AX767_RS06275 | Not Available | Positive | 1240652 - 1241413 | 26812.5 |
| hypothetical protein | AX767_RS06280 | Not Available | Negative | 1241437 - 1241640 | 7237.86 |
| rok family protein | AX767_RS06285 | Not Available | Negative | 1241654 - 1242583 | 31820.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
