Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. PAMC 28711 |
| Strain | strain PAMC28711 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
732838 bp
Thymine Count
735799 bp
Guanine Count
1423765 bp
Cytosine Count
1423750 bp
Genome Length
4316152 bp
Protein-coding Genes
4145 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3455 domain-containing protein | AX767_RS06040 | Not Available | Positive | 1193950 - 1194528 | 19848.9 |
| sigma-70 family rna polymerase sigma factor | AX767_RS06045 | Not Available | Positive | 1194649 - 1195173 | 19447.2 |
| anti-sigma factor domain-containing protein | AX767_RS06050 | Not Available | Positive | 1195161 - 1195877 | 25596.9 |
| hypothetical protein | AX767_RS06055 | Not Available | Negative | 1195895 - 1196509 | 21129.7 |
| protein no vein domain-containing protein | AX767_RS06060 | Not Available | Negative | 1196520 - 1197425 | 32437.5 |
| hypothetical protein | AX767_RS06065 | Not Available | Positive | 1197509 - 1198270 | 27863.7 |
| phytochelatin synthase family protein | AX767_RS06070 | Not Available | Negative | 1198246 - 1199205 | 33538.9 |
| type iii restriction-modification system endonuclease | AX767_RS06075 | Not Available | Negative | 1199245 - 1202361 | 116680.0 |
| atp-binding protein | AX767_RS06080 | Not Available | Negative | 1202480 - 1203562 | 41042.8 |
| is21-like element helper atpase istb | AX767_RS06085 | Not Available | Negative | 1203618 - 1204409 | 29048.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
